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dc.date.accessioned2022-02-10T18:47:15Z
dc.date.available2022-02-10T18:47:15Z
dc.date.created2021-10-27T22:26:51Z
dc.date.issued2021
dc.identifier.citationHou, Jie Strand-Amundsen, Runar Tronstad, Christian Høgetveit, Jan Olav Martinsen, Ørjan Grøttem Tønnessen, Tor Inge . Automatic prediction of ischemia-reperfusion injury of small intestine using convolutional neural networks: A pilot study. Sensors. 2021, 21(19)
dc.identifier.urihttp://hdl.handle.net/10852/90790
dc.description.abstractAcute intestinal ischemia is a life-threatening condition. The current gold standard, with evaluation based on visual and tactile sensation, has low specificity. In this study, we explore the feasibility of using machine learning models on images of the intestine, to assess small intestinal viability. A digital microscope was used to acquire images of the jejunum in 10 pigs. Ischemic segments were created by local clamping (approximately 30 cm in width) of small arteries and veins in the mesentery and reperfusion was initiated by releasing the clamps. A series of images were acquired once an hour on the surface of each of the segments. The convolutional neural network (CNN) has previously been used to classify medical images, while knowledge is lacking whether CNNs have potential to classify ischemia-reperfusion injury on the small intestine. We compared how different deep learning models perform for this task. Moreover, the Shapley additive explanations (SHAP) method within explainable artificial intelligence (AI) was used to identify features that the model utilizes as important in classification of different ischemic injury degrees. To be able to assess to what extent we can trust our deep learning model decisions is critical in a clinical setting. A probabilistic model Bayesian CNN was implemented to estimate the model uncertainty which provides a confidence measure of our model decisions.
dc.languageEN
dc.rightsAttribution 4.0 International
dc.rights.urihttps://creativecommons.org/licenses/by/4.0/
dc.titleAutomatic prediction of ischemia-reperfusion injury of small intestine using convolutional neural networks: A pilot study
dc.typeJournal article
dc.creator.authorHou, Jie
dc.creator.authorStrand-Amundsen, Runar
dc.creator.authorTronstad, Christian
dc.creator.authorHøgetveit, Jan Olav
dc.creator.authorMartinsen, Ørjan Grøttem
dc.creator.authorTønnessen, Tor Inge
cristin.unitcode185,15,4,0
cristin.unitnameFysisk institutt
cristin.ispublishedtrue
cristin.fulltextoriginal
cristin.qualitycode1
dc.identifier.cristin1949111
dc.identifier.bibliographiccitationinfo:ofi/fmt:kev:mtx:ctx&ctx_ver=Z39.88-2004&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.jtitle=Sensors&rft.volume=21&rft.spage=&rft.date=2021
dc.identifier.jtitleSensors
dc.identifier.volume21
dc.identifier.issue19
dc.identifier.pagecount14
dc.identifier.doihttps://doi.org/10.3390/s21196691
dc.identifier.urnURN:NBN:no-93393
dc.type.documentTidsskriftartikkel
dc.type.peerreviewedPeer reviewed
dc.source.issn1424-8220
dc.identifier.fulltextFulltext https://www.duo.uio.no/bitstream/handle/10852/90790/1/sensors-21-06691-v2.pdf
dc.type.versionPublishedVersion
cristin.articleid6691


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