Browsing Institutt for biovitenskap by Author "Pampoulie, Christophe"

Now showing items 1-10 of 10

  • Ancient DNA reveals the Arctic origin of Viking Age cod from Haithabu, Germany 
    Star, Bastiaan; Boessenkool, Sanne; Gondek, Agata Teresa; Nikulina, Elena A.; Hufthammer, Anne Karin; Pampoulie, Christophe; Knutsen, Halvor; André, Carl; Nistelberger, Heidi Maria; Dierking, Jan; Petereit, Christoph; Heinrich, Dirk; Jakobsen, Kjetill Sigurd; Stenseth, Nils Christian; Jentoft, Sissel; Barrett, James H. (Journal article / Tidsskriftartikkel / AcceptedVersion; Peer reviewed, 2017)
    Knowledge of the range and chronology of historic trade and long-distance transport of natural resources is essential for determining the impacts of past human activities on marine environments. However, the specific ...
  • Genomic characterization of the Atlantic cod sex-locus 
    Star, Bastiaan; Tørresen, Ole Kristian; Nederbragt, Alexander Johan; Jakobsen, Kjetill Sigurd; Pampoulie, Christophe; Jentoft, Sissel (Journal article / Tidsskriftartikkel / PublishedVersion; Peer reviewed, 2016)
    A variety of sex determination mechanisms can be observed in evolutionary divergent teleosts. Sex determination is genetic in Atlantic cod (Gadus morhua), however the genomic location or size of its sex-locus is unknown. ...
  • Hidden but revealed: After years of genetic studies behavioural monitoring combined with genomics uncover new insight into the population dynamics of Atlantic cod in Icelandic waters 
    Pampoulie, Christophe; Berg, Paul Ragnar; Jentoft, Sissel (Journal article / Tidsskriftartikkel / PublishedVersion; Peer reviewed, 2022)
    Stock structure is of paramount importance for sustainable management of exploited resources. In that context, genetic markers have been used for more than two decades to resolve spatial structure of marine exploited ...
  • How genomics can help biodiversity conservation 
    Theissinger, Kathrin; Fernandes, Carlos; Formenti, Giulio; Bista, Iliana; Berg, Paul Ragnar; Bleidorn, Christoph; Bombarely, Aureliano; Crottini, Angelica; Gallo, Guido R.; Godoy, José A.; Jentoft, Sissel; Malukiewicz, Joanna; Mouton, Alice; Oomen, Rebekah Alice; Paez, Sadye; Palsbøll, Per J.; Pampoulie, Christophe; Ruiz-López, María J.; Secomandi, Simona; Svardal, Hannes; Theofanopoulou, Constantina; de Vries, Jan; Waldvogel, Ann-Marie; Zhang, Guojie; Jarvis, Erich D.; Bálint, Miklós; Ciofi, Claudio; Waterhouse, Robert M.; Mazzoni, Camila J.; Höglund, Jacob (Journal article / Tidsskriftartikkel / PublishedVersion; Peer reviewed, 2023)
    The availability of public genomic resources can greatly assist biodiversity assessment, conservation, and restoration efforts by providing evidence for scientifically informed management decisions. Here we survey the main ...
  • Palindromic sequence artifacts generated during next generation sequencing library preparation from historic and ancient DNA 
    Star, Bastiaan; Nederbragt, Alexander Johan; Hansen, Marianne Helén Selander; Skage, Morten; Gilfillan, Gregor Duncan; Bradbury, Ian R.; Pampoulie, Christophe; Stenseth, Nils Christian; Jakobsen, Kjetill Sigurd; Jentoft, Sissel (Journal article / Tidsskriftartikkel / PublishedVersion; Peer reviewed, 2014)
    Degradation-specific processes and variation in laboratory protocols can bias the DNA sequence composition from samples of ancient or historic origin. Here, we identify a novel artifact in sequences from historic samples ...
  • Supergene origin and maintenance in Atlantic cod 
    Matschiner, Michael; Barth, Julia Maria Isis; Tørresen, Ole K.; Star, Bastiaan; Baalsrud, Helle Tessand; Brieuc, Marine Servane Ono; Pampoulie, Christophe; Bradbury, Ian; Jakobsen, Kjetill Sigurd; Jentoft, Sissel (Journal article / Tidsskriftartikkel / PublishedVersion; Peer reviewed, 2022)
    Abstract Supergenes are sets of genes that are inherited as a single marker and encode complex phenotypes through their joint action. They are identified in an increasing number of organisms, yet their origins and evolution ...
  • The era of reference genomes in conservation genomics 
    Formenti, Giulio; Theissinger, Kathrin; Fernandes, Carlos; Bista, Iliana; Bombarely, Aureliano; Bleidorn, Christoph; Ciofi, Claudio; Crottini, Angelica; Godoy, José A.; Höglund, Jacob; Malukiewicz, Joanna; Mouton, Alice; Oomen, Rebekah Alice; Paez, Sadye; Palsbøll, Per J.; Pampoulie, Christophe; Ruiz-López, María J.; Svardal, Hannes; Theofanopoulou, Constantina; de Vries, Jantina; Waldvogel, Ann-Marie; Zhang, Guojie; Mazzoni, Camila J.; Jarvis, Erich D.; Bálint, Miklós; Čiampor, Fedor; Aghayan, Sargis A.; Alioto, Tyler S.; Almudí, Isabel; Alvarez, Nadir; Alves, Paulo C.; Amorim, Isabel R.; Antunes, Agostinho; Arribas, Paula; Baldrian, Petr; Berg, Paul Ragnar; Bertorelle, Giorgio; Böhne, Astrid; Bonisoli-Alquati, Andrea; Boštjančić, Ljudevit L.; Boussau, Bastien; Breton, Catherine M.; Buzan, Elena; Campos, Paula F.; Carreras, Carlos; Castro, L. Filipe; Chueca, Luis J.; Conti, Elena; Cook-Deegan, Robert; Croll, Daniel; Cunha, Mónica V.; Delsuc, Frédéric; Dennis, Alice B.; Dimitrov, Dimitar; Gilbert, Marcus Thomas Pius; Heintzman, Peter D.; Jakobsen, Kjetill Sigurd; Jentoft, Sissel; Matschiner, Michael (Journal article / Tidsskriftartikkel / PublishedVersion; Peer reviewed, 2022)
    Progress in genome sequencing now enables the large-scale generation of reference genomes. Various international initiatives aim to generate reference genomes representing global biodiversity. These genomes provide unique ...
  • The role of genomic signatures of directional selection and demographic history in the population structure of a marine teleost with high gene flow 
    Weist, Peggy; Jentoft, Sissel; Tørresen, Ole K.; Schade, Franziska M.; Pampoulie, Christophe; Krumme, Uwe; Hanel, Reinhold (Journal article / Tidsskriftartikkel / PublishedVersion; Peer reviewed, 2022)
    Recent studies have uncovered patterns of genomic divergence in marine teleosts where panmixia due to high gene flow has been the general paradigm. These signatures of divergent selection are often impacted by structural ...
  • Three chromosomal rearrangements promote genomic divergence between migratory and stationary ecotypes of Atlantic cod 
    Berg, Paul Ragnar; Star, Bastiaan; Pampoulie, Christophe; Sodeland, Marte; Barth, Julia Maria Isis; Knutsen, Halvor; Jakobsen, Kjetill Sigurd; Jentoft, Sissel (Journal article / Tidsskriftartikkel / PublishedVersion; Peer reviewed, 2016)
    Identification of genome-wide patterns of divergence provides insight on how genomes are influenced by selection and can reveal the potential for local adaptation in spatially structured populations. In Atlantic cod – ...
  • Trans-oceanic genomic divergence of Atlantic cod ecotypes is associated with large inversions 
    Berg, Paul Ragnar; Star, Bastiaan; Pampoulie, Christophe; Bradbury, Ian R.; Bentzen, Paul; Hutchings, Jeffrey; Jentoft, Sissel; Jakobsen, Kjetill Sigurd (Journal article / Tidsskriftartikkel / PublishedVersion; Peer reviewed, 2017)
    Chromosomal rearrangements such as inversions can play a crucial role in maintaining polymorphism underlying complex traits and contribute to the process of speciation. In Atlantic cod (Gadus morhua), inversions of several ...