Browsing Museene by Author "Czech, Lucas"

Now showing items 1-2 of 2

  • Metagenomic analysis using phylogenetic placement--a review of the first decade 
    Czech, Lucas; Stamatakis, Alexandros; Dunthorn, Micah; Barbera, Pierre (Journal article / Tidsskriftartikkel / PublishedVersion; Peer reviewed, 2022)
    Phylogenetic placement refers to a family of tools and methods to analyze, visualize, and interpret the tsunami of metagenomic sequencing data generated by high-throughput sequencing. Compared to alternative (e. g., ...
  • Swarm v3: towards tera-scale amplicon clustering 
    Mahé, Frédéric; Czech, Lucas; Stamatakis, Alexandros; Quince, Christopher; de Vargas, Colomban; Dunthorn, Micah; Rognes, Torbjørn (Journal article / Tidsskriftartikkel / PublishedVersion; Peer reviewed, 2021)
    Motivation Previously we presented swarm, an open-source amplicon clustering programme that produces fine-scale molecular operational taxonomic units (OTUs) that are free of arbitrary global clustering thresholds. Here, ...