The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2022 update
dc.date.accessioned | 2023-03-16T16:19:43Z | |
dc.date.available | 2023-03-16T16:19:43Z | |
dc.date.created | 2022-04-22T14:43:37Z | |
dc.date.issued | 2022 | |
dc.identifier.citation | Ostrovsky, Alexander E Mahmoud, Alexandru Lonie, Andrew J Syme, Anna Fouilloux, Anne Claire Mireille Bretaudeau, Anthony Kumar, Anup Eschenlauer, Arthur C DeSanto, Assunta D Guerler, Aysam Serrano-Solano, Beatriz Batut, Berenice Grüning, Björn A. Langhorst, Bradley W Carr, Bridget Raubenolt, Bryan A Hyde, Cameron J Bromhead, Catherine J Barnett, Christopher B Royaux, Coline Gallardo, Cristóbal Blankenberg, Daniel Fornika, Daniel J Baker, Dannon Bouvier, Dave Clements, Dave de Lima Morais, David A Tabernero, David Lopez Lariviere, Delphine Nasr, Engy Afgan, Enis Zambelli, Federico Heyl, Florian Psomopoulos, Fotis Coppens, Frederik Price, Gareth R Cuccuru, Gianmauro Le Corguillé, Gildas Von Kuster, Greg Akbulut, Gulsum Gudukbay Rasche, Helena Hotz, Hans-Rudolf Eguinoa, Ignacio Makunin, Igor Ranawaka, Isuru J Taylor, James P Joshi, Jayadev Hillmann-Jackson, Jennifer Goecks, Jeremy Chiltin, John M . The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2022 update. Nucleic Acids Research (NAR). 2022, 50, W345-W351 | |
dc.identifier.uri | http://hdl.handle.net/10852/101530 | |
dc.description.abstract | Abstract Galaxy is a mature, browser accessible workbench for scientific computing. It enables scientists to share, analyze and visualize their own data, with minimal technical impediments. A thriving global community continues to use, maintain and contribute to the project, with support from multiple national infrastructure providers that enable freely accessible analysis and training services. The Galaxy Training Network supports free, self-directed, virtual training with >230 integrated tutorials. Project engagement metrics have continued to grow over the last 2 years, including source code contributions, publications, software packages wrapped as tools, registered users and their daily analysis jobs, and new independent specialized servers. Key Galaxy technical developments include an improved user interface for launching large-scale analyses with many files, interactive tools for exploratory data analysis, and a complete suite of machine learning tools. Important scientific developments enabled by Galaxy include Vertebrate Genome Project (VGP) assembly workflows and global SARS-CoV-2 collaborations. | |
dc.language | EN | |
dc.rights | Attribution 4.0 International | |
dc.rights.uri | https://creativecommons.org/licenses/by/4.0/ | |
dc.title | The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2022 update | |
dc.title.alternative | ENEngelskEnglishThe Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2022 update | |
dc.type | Journal article | |
dc.creator.author | Ostrovsky, Alexander E | |
dc.creator.author | Mahmoud, Alexandru | |
dc.creator.author | Lonie, Andrew J | |
dc.creator.author | Syme, Anna | |
dc.creator.author | Fouilloux, Anne Claire Mireille | |
dc.creator.author | Bretaudeau, Anthony | |
dc.creator.author | Kumar, Anup | |
dc.creator.author | Eschenlauer, Arthur C | |
dc.creator.author | DeSanto, Assunta D | |
dc.creator.author | Guerler, Aysam | |
dc.creator.author | Serrano-Solano, Beatriz | |
dc.creator.author | Batut, Berenice | |
dc.creator.author | Grüning, Björn A. | |
dc.creator.author | Langhorst, Bradley W | |
dc.creator.author | Carr, Bridget | |
dc.creator.author | Raubenolt, Bryan A | |
dc.creator.author | Hyde, Cameron J | |
dc.creator.author | Bromhead, Catherine J | |
dc.creator.author | Barnett, Christopher B | |
dc.creator.author | Royaux, Coline | |
dc.creator.author | Gallardo, Cristóbal | |
dc.creator.author | Blankenberg, Daniel | |
dc.creator.author | Fornika, Daniel J | |
dc.creator.author | Baker, Dannon | |
dc.creator.author | Bouvier, Dave | |
dc.creator.author | Clements, Dave | |
dc.creator.author | de Lima Morais, David A | |
dc.creator.author | Tabernero, David Lopez | |
dc.creator.author | Lariviere, Delphine | |
dc.creator.author | Nasr, Engy | |
dc.creator.author | Afgan, Enis | |
dc.creator.author | Zambelli, Federico | |
dc.creator.author | Heyl, Florian | |
dc.creator.author | Psomopoulos, Fotis | |
dc.creator.author | Coppens, Frederik | |
dc.creator.author | Price, Gareth R | |
dc.creator.author | Cuccuru, Gianmauro | |
dc.creator.author | Le Corguillé, Gildas | |
dc.creator.author | Von Kuster, Greg | |
dc.creator.author | Akbulut, Gulsum Gudukbay | |
dc.creator.author | Rasche, Helena | |
dc.creator.author | Hotz, Hans-Rudolf | |
dc.creator.author | Eguinoa, Ignacio | |
dc.creator.author | Makunin, Igor | |
dc.creator.author | Ranawaka, Isuru J | |
dc.creator.author | Taylor, James P | |
dc.creator.author | Joshi, Jayadev | |
dc.creator.author | Hillmann-Jackson, Jennifer | |
dc.creator.author | Goecks, Jeremy | |
dc.creator.author | Chiltin, John M | |
cristin.unitcode | 185,15,22,0 | |
cristin.unitname | Institutt for geofag | |
cristin.ispublished | true | |
cristin.fulltext | original | |
cristin.qualitycode | 2 | |
dc.identifier.cristin | 2018483 | |
dc.identifier.bibliographiccitation | info:ofi/fmt:kev:mtx:ctx&ctx_ver=Z39.88-2004&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.jtitle=Nucleic Acids Research (NAR)&rft.volume=50&rft.spage=W345&rft.date=2022 | |
dc.identifier.jtitle | Nucleic Acids Research (NAR) | |
dc.identifier.volume | 50 | |
dc.identifier.issue | W1 | |
dc.identifier.startpage | W345 | |
dc.identifier.endpage | W351 | |
dc.identifier.doi | https://doi.org/10.1093/nar/gkac247 | |
dc.type.document | Tidsskriftartikkel | |
dc.type.peerreviewed | Peer reviewed | |
dc.source.issn | 0305-1048 | |
dc.type.version | PublishedVersion |
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